Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.22□□□□□ -0.29
Scn2bQ56A07 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.22□□□□□ -0.29
Scn2bQ56A07 Gm20445-201ENSMUST00000061905 565 ntBASIC13.22□□□□□ -0.29
Scn2bQ56A07 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.22□□□□□ -0.29
Scn2bQ56A07 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Scn2bQ56A07 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.21□□□□□ -0.29
Scn2bQ56A07 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Gm14719-201ENSMUST00000121891 340 ntBASIC13.21□□□□□ -0.29
Scn2bQ56A07 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn2bQ56A07 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Scn2bQ56A07 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.21□□□□□ -0.29
Scn2bQ56A07 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.21□□□□□ -0.29
Scn2bQ56A07 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn2bQ56A07 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn2bQ56A07 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Scn2bQ56A07 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Scn2bQ56A07 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Scn2bQ56A07 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Scn2bQ56A07 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn2bQ56A07 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn2bQ56A07 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Scn2bQ56A07 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn2bQ56A07 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.2□□□□□ -0.3
Scn2bQ56A07 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Scn2bQ56A07 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.2□□□□□ -0.3
Scn2bQ56A07 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.2□□□□□ -0.3
Scn2bQ56A07 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn2bQ56A07 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms