Protein–RNA interactions for Protein: Q3V0X1

Smim9, Small integral membrane protein 9, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim9Q3V0X1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Gm7153-201ENSMUST00000117092 455 ntBASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Gm27301-201ENSMUST00000184012 127 ntBASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Gm33142-201ENSMUST00000193913 867 ntBASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.28□□□□□ -0.76
Smim9Q3V0X1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smim9Q3V0X1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smim9Q3V0X1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smim9Q3V0X1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Smim9Q3V0X1 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
Smim9Q3V0X1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Gm9385-201ENSMUST00000117563 472 ntBASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Gm14859-201ENSMUST00000117752 357 ntBASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.27□□□□□ -0.77
Smim9Q3V0X1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Thap2-203ENSMUST00000218989 527 ntBASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.27□□□□□ -0.77
Smim9Q3V0X1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.26□□□□□ -0.77
Smim9Q3V0X1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Smim9Q3V0X1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms