Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Gm4864-201ENSMUST00000219894 1461 ntBASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Gm5904-201ENSMUST00000210286 865 ntBASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Arhgef40Q3UPH7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Gm8018-201ENSMUST00000173536 789 ntBASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Gm3096-201ENSMUST00000185770 364 ntBASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Gm39404-201ENSMUST00000216350 313 ntBASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Arhgef40Q3UPH7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Gm9083-201ENSMUST00000120423 819 ntBASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 AC167013.1-201ENSMUST00000228592 202 ntBASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Arhgef40Q3UPH7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Arhgef40Q3UPH7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Arhgef40Q3UPH7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Arhgef40Q3UPH7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Arhgef40Q3UPH7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Gm8856-201ENSMUST00000185254 1144 ntBASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Gm37201-201ENSMUST00000191845 523 ntBASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Arhgef40Q3UPH7 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC19.25■□□□□ 0.67
Arhgef40Q3UPH7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Arhgef40Q3UPH7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Arhgef40Q3UPH7 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Arhgef40Q3UPH7 Gm10109-202ENSMUST00000206890 1211 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms