Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Upf3aQ3ULJ3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upf3aQ3ULJ3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upf3aQ3ULJ3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upf3aQ3ULJ3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Upf3aQ3ULJ3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.01□□□□□ -0.17
Upf3aQ3ULJ3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upf3aQ3ULJ3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.01□□□□□ -0.17
Upf3aQ3ULJ3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Upf3aQ3ULJ3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upf3aQ3ULJ3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.01□□□□□ -0.17
Upf3aQ3ULJ3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Upf3aQ3ULJ3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Gm43205-201ENSMUST00000198622 1968 ntBASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Gm11978-201ENSMUST00000122315 466 ntBASIC14□□□□□ -0.17
Upf3aQ3ULJ3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Gm5896-201ENSMUST00000189662 1024 ntBASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Gm37042-201ENSMUST00000193816 581 ntBASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Upf3aQ3ULJ3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Gm37466-201ENSMUST00000195692 652 ntBASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upf3aQ3ULJ3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Gm17376-201ENSMUST00000166016 84 ntBASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Upf3aQ3ULJ3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms