Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Gm10060-201ENSMUST00000212002 111 ntBASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Map1b-203ENSMUST00000223725 2669 ntBASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hddc2Q3SXD3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Gm24589-201ENSMUST00000116692 94 ntBASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Gm16026-204ENSMUST00000162652 683 ntBASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.37□□□□□ -0.43
Hddc2Q3SXD3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms