Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Gm9025-201ENSMUST00000122415 1575 ntBASIC20.72■□□□□ 0.91
Shroom4Q1W617 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Gm45495-201ENSMUST00000200940 1700 ntBASIC20.72■□□□□ 0.91
Shroom4Q1W617 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Shroom4Q1W617 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Gzmn-202ENSMUST00000225535 989 ntBASIC20.72■□□□□ 0.91
Shroom4Q1W617 AC113060.1-201ENSMUST00000225689 1573 ntBASIC20.72■□□□□ 0.91
Shroom4Q1W617 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Shroom4Q1W617 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Gm7003-201ENSMUST00000195089 312 ntBASIC20.71■□□□□ 0.91
Shroom4Q1W617 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC20.71■□□□□ 0.91
Shroom4Q1W617 CT025694.1-201ENSMUST00000226188 934 ntBASIC20.71■□□□□ 0.91
Shroom4Q1W617 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Gm44094-201ENSMUST00000204703 2030 ntBASIC20.71■□□□□ 0.91
Shroom4Q1W617 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom4Q1W617 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Shroom4Q1W617 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 CU062626.3-201ENSMUST00000225522 1411 ntBASIC20.7■□□□□ 0.9
Shroom4Q1W617 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Gm5989-201ENSMUST00000096092 2077 ntBASIC20.7■□□□□ 0.9
Shroom4Q1W617 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Gm11331-201ENSMUST00000119764 288 ntBASIC20.7■□□□□ 0.9
Shroom4Q1W617 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Gm8959-201ENSMUST00000213150 571 ntBASIC20.7■□□□□ 0.9
Shroom4Q1W617 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Sybu-209ENSMUST00000228639 4113 ntBASIC20.7■□□□□ 0.9
Shroom4Q1W617 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Shroom4Q1W617 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom4Q1W617 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC20.7■□□□□ 0.9
Shroom4Q1W617 Gm16481-201ENSMUST00000119074 1227 ntBASIC20.69■□□□□ 0.9
Shroom4Q1W617 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Gm8546-201ENSMUST00000178288 1264 ntBASIC20.69■□□□□ 0.9
Shroom4Q1W617 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC20.69■□□□□ 0.9
Shroom4Q1W617 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC20.69■□□□□ 0.9
Shroom4Q1W617 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Gm6963-201ENSMUST00000147879 379 ntBASIC20.69■□□□□ 0.9
Shroom4Q1W617 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Gm5523-201ENSMUST00000180415 997 ntBASIC20.69■□□□□ 0.9
Shroom4Q1W617 Gm27023-201ENSMUST00000182372 285 ntBASIC20.69■□□□□ 0.9
Shroom4Q1W617 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom4Q1W617 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms