Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.84□□□□□ -0.51
Rab42Q0PD08 Gm18049-201ENSMUST00000208909 581 ntBASIC11.84□□□□□ -0.51
Rab42Q0PD08 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab42Q0PD08 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Rab42Q0PD08 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rab42Q0PD08 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rab42Q0PD08 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm29310-201ENSMUST00000185468 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21825-201ENSMUST00000185728 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm29109-201ENSMUST00000185895 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21896-201ENSMUST00000186520 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21873-201ENSMUST00000186728 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21794-201ENSMUST00000187056 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21880-201ENSMUST00000187275 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21826-201ENSMUST00000187451 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21198-201ENSMUST00000188393 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21749-201ENSMUST00000189343 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21901-201ENSMUST00000189568 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm29424-201ENSMUST00000189716 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm28599-201ENSMUST00000189838 694 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21867-201ENSMUST00000189917 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm29269-201ENSMUST00000190087 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21722-201ENSMUST00000190153 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm28423-201ENSMUST00000190701 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21899-201ENSMUST00000190745 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21910-201ENSMUST00000191163 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21849-201ENSMUST00000191571 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm28678-201ENSMUST00000191593 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm20910-201ENSMUST00000193268 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Gm21871-201ENSMUST00000194621 696 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rab42Q0PD08 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.83□□□□□ -0.52
Rab42Q0PD08 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rab42Q0PD08 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.82□□□□□ -0.52
Rab42Q0PD08 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms