Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cacna1aP97445 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Cacna1aP97445 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cacna1aP97445 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.33□□□□□ -0.44
Cacna1aP97445 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cacna1aP97445 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cacna1aP97445 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cacna1aP97445 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cacna1aP97445 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.33□□□□□ -0.44
Cacna1aP97445 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cacna1aP97445 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cacna1aP97445 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cacna1aP97445 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cacna1aP97445 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Cacna1aP97445 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Cacna1aP97445 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.33□□□□□ -0.44
Cacna1aP97445 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cacna1aP97445 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cacna1aP97445 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.33□□□□□ -0.44
Cacna1aP97445 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cacna1aP97445 Gm45186-201ENSMUST00000206874 478 ntBASIC12.33□□□□□ -0.44
Cacna1aP97445 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.33□□□□□ -0.44
Cacna1aP97445 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cacna1aP97445 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.32□□□□□ -0.44
Cacna1aP97445 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm14277-201ENSMUST00000121195 360 ntBASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm14017-201ENSMUST00000121934 386 ntBASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.32□□□□□ -0.44
Cacna1aP97445 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm27023-201ENSMUST00000182372 285 ntBASIC12.32□□□□□ -0.44
Cacna1aP97445 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Cacna1aP97445 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.32□□□□□ -0.44
Cacna1aP97445 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.32□□□□□ -0.44
Cacna1aP97445 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cacna1aP97445 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm11637-201ENSMUST00000120601 592 ntBASIC12.32□□□□□ -0.44
Cacna1aP97445 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.32□□□□□ -0.44
Cacna1aP97445 Mir1943-201ENSMUST00000158276 73 ntBASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm8194-201ENSMUST00000159783 859 ntBASIC12.32□□□□□ -0.44
Cacna1aP97445 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Cacna1aP97445 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.32□□□□□ -0.44
Cacna1aP97445 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cacna1aP97445 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cacna1aP97445 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cacna1aP97445 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.31□□□□□ -0.44
Cacna1aP97445 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Cacna1aP97445 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Cacna1aP97445 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.31□□□□□ -0.44
Cacna1aP97445 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cacna1aP97445 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.31□□□□□ -0.44
Cacna1aP97445 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cacna1aP97445 Gm14028-201ENSMUST00000117434 479 ntBASIC12.31□□□□□ -0.44
Cacna1aP97445 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.31□□□□□ -0.44
Cacna1aP97445 Gm37489-201ENSMUST00000191883 159 ntBASIC12.31□□□□□ -0.44
Cacna1aP97445 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.31□□□□□ -0.44
Cacna1aP97445 Gm18584-201ENSMUST00000203098 964 ntBASIC12.31□□□□□ -0.44
Cacna1aP97445 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.31□□□□□ -0.44
Cacna1aP97445 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.31□□□□□ -0.44
Cacna1aP97445 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms