Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SgcaP82350 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcaP82350 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcaP82350 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcaP82350 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SgcaP82350 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SgcaP82350 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SgcaP82350 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
SgcaP82350 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.18□□□□□ -0.62
SgcaP82350 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SgcaP82350 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SgcaP82350 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.18□□□□□ -0.62
SgcaP82350 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.18□□□□□ -0.62
SgcaP82350 Gm2651-201ENSMUST00000203560 838 ntBASIC11.18□□□□□ -0.62
SgcaP82350 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.18□□□□□ -0.62
SgcaP82350 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.18□□□□□ -0.62
SgcaP82350 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
SgcaP82350 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SgcaP82350 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.18□□□□□ -0.62
SgcaP82350 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SgcaP82350 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
SgcaP82350 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SgcaP82350 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.18□□□□□ -0.62
SgcaP82350 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
SgcaP82350 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.17□□□□□ -0.62
SgcaP82350 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SgcaP82350 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.17□□□□□ -0.62
SgcaP82350 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.17□□□□□ -0.62
SgcaP82350 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.17□□□□□ -0.62
SgcaP82350 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 Gm17968-201ENSMUST00000194902 784 ntBASIC11.17□□□□□ -0.62
SgcaP82350 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.17□□□□□ -0.62
SgcaP82350 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SgcaP82350 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.17□□□□□ -0.62
SgcaP82350 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SgcaP82350 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SgcaP82350 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.17□□□□□ -0.62
SgcaP82350 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SgcaP82350 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SgcaP82350 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
SgcaP82350 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms