Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SgcbP82349 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.91□□□□□ -0.5
SgcbP82349 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SgcbP82349 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SgcbP82349 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.91□□□□□ -0.5
SgcbP82349 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.91□□□□□ -0.5
SgcbP82349 Mir1894-201ENSMUST00000122802 81 ntBASIC11.91□□□□□ -0.5
SgcbP82349 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SgcbP82349 Gm21156-201ENSMUST00000189693 869 ntBASIC11.91□□□□□ -0.5
SgcbP82349 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.91□□□□□ -0.5
SgcbP82349 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SgcbP82349 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SgcbP82349 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.91□□□□□ -0.5
SgcbP82349 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcbP82349 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
SgcbP82349 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
SgcbP82349 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.9□□□□□ -0.5
SgcbP82349 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
SgcbP82349 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.9□□□□□ -0.5
SgcbP82349 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
SgcbP82349 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.9□□□□□ -0.5
SgcbP82349 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.9□□□□□ -0.5
SgcbP82349 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.9□□□□□ -0.5
SgcbP82349 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.9□□□□□ -0.5
SgcbP82349 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Gm6244-201ENSMUST00000178732 841 ntBASIC11.9□□□□□ -0.5
SgcbP82349 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Gm45925-201ENSMUST00000218882 744 ntBASIC11.9□□□□□ -0.5
SgcbP82349 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
SgcbP82349 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
SgcbP82349 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SgcbP82349 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.9□□□□□ -0.5
SgcbP82349 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.9□□□□□ -0.5
SgcbP82349 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
SgcbP82349 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcbP82349 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
SgcbP82349 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcbP82349 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms