Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SgcdP82347 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Gm12151-201ENSMUST00000121374 290 ntBASIC12.42□□□□□ -0.42
SgcdP82347 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SgcdP82347 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SgcdP82347 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SgcdP82347 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SgcdP82347 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.42□□□□□ -0.42
SgcdP82347 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.42□□□□□ -0.42
SgcdP82347 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.42□□□□□ -0.42
SgcdP82347 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.42□□□□□ -0.42
SgcdP82347 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SgcdP82347 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.42□□□□□ -0.42
SgcdP82347 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SgcdP82347 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SgcdP82347 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SgcdP82347 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SgcdP82347 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SgcdP82347 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SgcdP82347 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.41□□□□□ -0.42
SgcdP82347 Gm8410-201ENSMUST00000117225 605 ntBASIC12.41□□□□□ -0.42
SgcdP82347 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SgcdP82347 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.41□□□□□ -0.42
SgcdP82347 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.41□□□□□ -0.42
SgcdP82347 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.41□□□□□ -0.42
SgcdP82347 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SgcdP82347 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.41□□□□□ -0.42
SgcdP82347 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SgcdP82347 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.41□□□□□ -0.42
SgcdP82347 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SgcdP82347 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SgcdP82347 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.41□□□□□ -0.42
SgcdP82347 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SgcdP82347 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.41□□□□□ -0.42
SgcdP82347 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SgcdP82347 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.41□□□□□ -0.42
SgcdP82347 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
SgcdP82347 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.4□□□□□ -0.42
SgcdP82347 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.4□□□□□ -0.42
SgcdP82347 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SgcdP82347 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SgcdP82347 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Gm25287-201ENSMUST00000103846 110 ntBASIC12.4□□□□□ -0.42
SgcdP82347 Gm22918-201ENSMUST00000103855 110 ntBASIC12.4□□□□□ -0.42
SgcdP82347 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SgcdP82347 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SgcdP82347 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.4□□□□□ -0.42
SgcdP82347 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms