Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pdlim4P70271 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Pdlim4P70271 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pdlim4P70271 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pdlim4P70271 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.15□□□□□ -0.63
Pdlim4P70271 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pdlim4P70271 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pdlim4P70271 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Pdlim4P70271 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pdlim4P70271 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pdlim4P70271 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pdlim4P70271 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.14□□□□□ -0.63
Pdlim4P70271 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Pdlim4P70271 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pdlim4P70271 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.14□□□□□ -0.63
Pdlim4P70271 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.14□□□□□ -0.63
Pdlim4P70271 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Gm19078-201ENSMUST00000206311 727 ntBASIC11.14□□□□□ -0.63
Pdlim4P70271 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pdlim4P70271 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pdlim4P70271 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pdlim4P70271 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pdlim4P70271 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdlim4P70271 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Pdlim4P70271 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pdlim4P70271 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pdlim4P70271 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.13□□□□□ -0.63
Pdlim4P70271 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.13□□□□□ -0.63
Pdlim4P70271 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.13□□□□□ -0.63
Pdlim4P70271 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.13□□□□□ -0.63
Pdlim4P70271 Gm7063-201ENSMUST00000186840 981 ntBASIC11.13□□□□□ -0.63
Pdlim4P70271 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pdlim4P70271 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pdlim4P70271 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pdlim4P70271 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.13□□□□□ -0.63
Pdlim4P70271 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pdlim4P70271 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Pdlim4P70271 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdlim4P70271 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.13□□□□□ -0.63
Pdlim4P70271 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms