Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Nup43P59235 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nup43P59235 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Nup43P59235 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nup43P59235 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.61□□□□□ -0.39
Nup43P59235 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nup43P59235 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nup43P59235 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Nup43P59235 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.61□□□□□ -0.39
Nup43P59235 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Nup43P59235 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.61□□□□□ -0.39
Nup43P59235 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.61□□□□□ -0.39
Nup43P59235 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.61□□□□□ -0.39
Nup43P59235 Gm7653-201ENSMUST00000214567 508 ntBASIC12.61□□□□□ -0.39
Nup43P59235 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nup43P59235 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nup43P59235 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nup43P59235 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nup43P59235 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.61□□□□□ -0.39
Nup43P59235 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup43P59235 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.6□□□□□ -0.39
Nup43P59235 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.6□□□□□ -0.39
Nup43P59235 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nup43P59235 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.6□□□□□ -0.39
Nup43P59235 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nup43P59235 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.6□□□□□ -0.39
Nup43P59235 Gm11424-201ENSMUST00000121929 829 ntBASIC12.6□□□□□ -0.39
Nup43P59235 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Gm8463-201ENSMUST00000208573 613 ntBASIC12.6□□□□□ -0.39
Nup43P59235 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.6□□□□□ -0.39
Nup43P59235 Itm2b-204ENSMUST00000228637 783 ntBASIC12.6□□□□□ -0.39
Nup43P59235 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nup43P59235 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.6□□□□□ -0.39
Nup43P59235 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nup43P59235 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Nup43P59235 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup43P59235 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.59□□□□□ -0.39
Nup43P59235 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup43P59235 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Nup43P59235 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms