Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Tpm1P58771 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.89□□□□□ -0.03
Tpm1P58771 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.89□□□□□ -0.03
Tpm1P58771 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Tpm1P58771 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Tpm1P58771 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Tpm1P58771 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.89□□□□□ -0.03
Tpm1P58771 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.89□□□□□ -0.03
Tpm1P58771 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.89□□□□□ -0.03
Tpm1P58771 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.89□□□□□ -0.03
Tpm1P58771 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.89□□□□□ -0.03
Tpm1P58771 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.89□□□□□ -0.03
Tpm1P58771 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 Gm6916-202ENSMUST00000205523 195 ntBASIC14.89□□□□□ -0.03
Tpm1P58771 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.89□□□□□ -0.03
Tpm1P58771 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Tpm1P58771 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Tpm1P58771 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Tpm1P58771 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Tpm1P58771 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tpm1P58771 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Tpm1P58771 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Tpm1P58771 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tpm1P58771 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.88□□□□□ -0.03
Tpm1P58771 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.88□□□□□ -0.03
Tpm1P58771 Gm18889-201ENSMUST00000174284 929 ntBASIC14.88□□□□□ -0.03
Tpm1P58771 Gm27494-201ENSMUST00000184735 189 ntBASIC14.88□□□□□ -0.03
Tpm1P58771 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.88□□□□□ -0.03
Tpm1P58771 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.88□□□□□ -0.03
Tpm1P58771 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.88□□□□□ -0.03
Tpm1P58771 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Tpm1P58771 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tpm1P58771 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Tpm1P58771 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tpm1P58771 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tpm1P58771 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.88□□□□□ -0.03
Tpm1P58771 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.88□□□□□ -0.03
Tpm1P58771 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tpm1P58771 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.87□□□□□ -0.03
Tpm1P58771 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.87□□□□□ -0.03
Tpm1P58771 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.87□□□□□ -0.03
Tpm1P58771 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.87□□□□□ -0.03
Tpm1P58771 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.87□□□□□ -0.03
Tpm1P58771 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Gm25287-201ENSMUST00000103846 110 ntBASIC14.87□□□□□ -0.03
Tpm1P58771 Gm22918-201ENSMUST00000103855 110 ntBASIC14.87□□□□□ -0.03
Tpm1P58771 Mir1895-201ENSMUST00000122615 79 ntBASIC14.87□□□□□ -0.03
Tpm1P58771 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
Tpm1P58771 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.87□□□□□ -0.03
Tpm1P58771 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.87□□□□□ -0.03
Tpm1P58771 Gm33320-201ENSMUST00000192232 530 ntBASIC14.87□□□□□ -0.03
Tpm1P58771 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.87□□□□□ -0.03
Tpm1P58771 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.87□□□□□ -0.03
Tpm1P58771 Dupd1-202ENSMUST00000224735 548 ntBASIC14.87□□□□□ -0.03
Tpm1P58771 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.87□□□□□ -0.03
Tpm1P58771 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Tpm1P58771 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tpm1P58771 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tpm1P58771 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms