Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdh11P55288 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdh11P55288 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdh11P55288 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh11P55288 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.2□□□□□ -0.46
Cdh11P55288 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh11P55288 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh11P55288 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh11P55288 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Cdh11P55288 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.2□□□□□ -0.46
Cdh11P55288 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdh11P55288 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdh11P55288 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Cdh11P55288 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.19□□□□□ -0.46
Cdh11P55288 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdh11P55288 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Cdh11P55288 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdh11P55288 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdh11P55288 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Cdh11P55288 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Cdh11P55288 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.19□□□□□ -0.46
Cdh11P55288 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdh11P55288 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh11P55288 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdh11P55288 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.18□□□□□ -0.46
Cdh11P55288 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Cdh11P55288 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdh11P55288 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.18□□□□□ -0.46
Cdh11P55288 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.18□□□□□ -0.46
Cdh11P55288 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdh11P55288 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdh11P55288 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.18□□□□□ -0.46
Cdh11P55288 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.18□□□□□ -0.46
Cdh11P55288 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.18□□□□□ -0.46
Cdh11P55288 Gm44719-201ENSMUST00000206404 149 ntBASIC12.18□□□□□ -0.46
Cdh11P55288 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdh11P55288 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.18□□□□□ -0.46
Cdh11P55288 Gm6218-201ENSMUST00000219812 628 ntBASIC12.18□□□□□ -0.46
Cdh11P55288 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.18□□□□□ -0.46
Cdh11P55288 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdh11P55288 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.18□□□□□ -0.46
Cdh11P55288 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdh11P55288 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Cdh11P55288 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdh11P55288 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh11P55288 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdh11P55288 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdh11P55288 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms