Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.59□□□□□ -0.23
Sox1P53783 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.59□□□□□ -0.23
Sox1P53783 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox1P53783 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox1P53783 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox1P53783 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox1P53783 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Sox1P53783 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox1P53783 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Sox1P53783 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox1P53783 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Sox1P53783 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sox1P53783 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Sox1P53783 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox1P53783 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox1P53783 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox1P53783 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Sox1P53783 Gm15432-201ENSMUST00000121106 195 ntBASIC13.58□□□□□ -0.24
Sox1P53783 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Sox1P53783 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sox1P53783 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox1P53783 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.58□□□□□ -0.24
Sox1P53783 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.58□□□□□ -0.24
Sox1P53783 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.58□□□□□ -0.24
Sox1P53783 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
Sox1P53783 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.58□□□□□ -0.24
Sox1P53783 Gm6458-201ENSMUST00000211573 635 ntBASIC13.58□□□□□ -0.24
Sox1P53783 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.58□□□□□ -0.24
Sox1P53783 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.58□□□□□ -0.24
Sox1P53783 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox1P53783 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox1P53783 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.58□□□□□ -0.24
Sox1P53783 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox1P53783 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sox1P53783 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sox1P53783 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sox1P53783 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.58□□□□□ -0.24
Sox1P53783 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox1P53783 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox1P53783 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox1P53783 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox1P53783 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Sox1P53783 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Sox1P53783 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Sox1P53783 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Sox1P53783 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.57□□□□□ -0.24
Sox1P53783 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox1P53783 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox1P53783 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.57□□□□□ -0.24
Sox1P53783 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.57□□□□□ -0.24
Sox1P53783 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Sox1P53783 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Gm19353-201ENSMUST00000184561 445 ntBASIC13.57□□□□□ -0.24
Sox1P53783 Gm37905-201ENSMUST00000195310 341 ntBASIC13.57□□□□□ -0.24
Sox1P53783 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.57□□□□□ -0.24
Sox1P53783 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Gm45433-201ENSMUST00000209386 247 ntBASIC13.57□□□□□ -0.24
Sox1P53783 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.57□□□□□ -0.24
Sox1P53783 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Gm8712-201ENSMUST00000221090 701 ntBASIC13.57□□□□□ -0.24
Sox1P53783 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox1P53783 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox1P53783 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox1P53783 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Sox1P53783 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Sox1P53783 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox1P53783 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox1P53783 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms