Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.06□□□□□ -0.64
Nkx2-1P50220 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.06□□□□□ -0.64
Nkx2-1P50220 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.06□□□□□ -0.64
Nkx2-1P50220 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Gm38225-201ENSMUST00000194001 393 ntBASIC11.06□□□□□ -0.64
Nkx2-1P50220 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.06□□□□□ -0.64
Nkx2-1P50220 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.06□□□□□ -0.64
Nkx2-1P50220 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-1P50220 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.05□□□□□ -0.64
Nkx2-1P50220 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.05□□□□□ -0.64
Nkx2-1P50220 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.05□□□□□ -0.64
Nkx2-1P50220 Gm2213-201ENSMUST00000197485 688 ntBASIC11.05□□□□□ -0.64
Nkx2-1P50220 Gm45453-201ENSMUST00000211758 853 ntBASIC11.05□□□□□ -0.64
Nkx2-1P50220 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.05□□□□□ -0.64
Nkx2-1P50220 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Mir125a-201ENSMUST00000083545 68 ntBASIC11.05□□□□□ -0.64
Nkx2-1P50220 Mir497b-201ENSMUST00000093601 125 ntBASIC11.05□□□□□ -0.64
Nkx2-1P50220 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.05□□□□□ -0.64
Nkx2-1P50220 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-1P50220 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms