Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Prox1P48437 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Prox1P48437 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Prox1P48437 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.83□□□□□ -0.36
Prox1P48437 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.82□□□□□ -0.36
Prox1P48437 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Prox1P48437 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Gm25287-201ENSMUST00000103846 110 ntBASIC12.82□□□□□ -0.36
Prox1P48437 Gm22918-201ENSMUST00000103855 110 ntBASIC12.82□□□□□ -0.36
Prox1P48437 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.82□□□□□ -0.36
Prox1P48437 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.82□□□□□ -0.36
Prox1P48437 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.82□□□□□ -0.36
Prox1P48437 Auts2-212ENSMUST00000178555 309 ntBASIC12.82□□□□□ -0.36
Prox1P48437 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.82□□□□□ -0.36
Prox1P48437 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.82□□□□□ -0.36
Prox1P48437 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Prox1P48437 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.82□□□□□ -0.36
Prox1P48437 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Prox1P48437 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prox1P48437 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.82□□□□□ -0.36
Prox1P48437 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.81□□□□□ -0.36
Prox1P48437 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Prox1P48437 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.81□□□□□ -0.36
Prox1P48437 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.81□□□□□ -0.36
Prox1P48437 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Prox1P48437 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Prox1P48437 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.81□□□□□ -0.36
Prox1P48437 Gm9719-201ENSMUST00000162765 543 ntBASIC12.81□□□□□ -0.36
Prox1P48437 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.81□□□□□ -0.36
Prox1P48437 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.81□□□□□ -0.36
Prox1P48437 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Prox1P48437 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.81□□□□□ -0.36
Prox1P48437 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.81□□□□□ -0.36
Prox1P48437 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.81□□□□□ -0.36
Prox1P48437 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Prox1P48437 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Prox1P48437 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prox1P48437 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.8□□□□□ -0.36
Prox1P48437 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Prox1P48437 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.8□□□□□ -0.36
Prox1P48437 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms