Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rfx3P48381 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Gm24420-201ENSMUST00000176676 59 ntBASIC12.09□□□□□ -0.47
Rfx3P48381 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.09□□□□□ -0.47
Rfx3P48381 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rfx3P48381 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rfx3P48381 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rfx3P48381 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.09□□□□□ -0.47
Rfx3P48381 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rfx3P48381 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfx3P48381 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rfx3P48381 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rfx3P48381 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rfx3P48381 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.08□□□□□ -0.48
Rfx3P48381 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Gm6912-201ENSMUST00000117218 544 ntBASIC12.08□□□□□ -0.48
Rfx3P48381 Gm13223-201ENSMUST00000118609 747 ntBASIC12.08□□□□□ -0.48
Rfx3P48381 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.08□□□□□ -0.48
Rfx3P48381 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.08□□□□□ -0.48
Rfx3P48381 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rfx3P48381 Gm9063-201ENSMUST00000223299 582 ntBASIC12.08□□□□□ -0.48
Rfx3P48381 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.08□□□□□ -0.48
Rfx3P48381 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rfx3P48381 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rfx3P48381 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rfx3P48381 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfx3P48381 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.07□□□□□ -0.48
Rfx3P48381 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.07□□□□□ -0.48
Rfx3P48381 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.07□□□□□ -0.48
Rfx3P48381 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.07□□□□□ -0.48
Rfx3P48381 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rfx3P48381 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Rfx3P48381 Mir7023-201ENSMUST00000185093 64 ntBASIC12.07□□□□□ -0.48
Rfx3P48381 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rfx3P48381 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.07□□□□□ -0.48
Rfx3P48381 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.07□□□□□ -0.48
Rfx3P48381 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.07□□□□□ -0.48
Rfx3P48381 Gm7775-201ENSMUST00000218871 853 ntBASIC12.07□□□□□ -0.48
Rfx3P48381 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Syt7-205ENSMUST00000224135 1557 ntBASIC12.07□□□□□ -0.48
Rfx3P48381 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rfx3P48381 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.07□□□□□ -0.48
Rfx3P48381 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.07□□□□□ -0.48
Rfx3P48381 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rfx3P48381 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rfx3P48381 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfx3P48381 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms