Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox18P43680 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox18P43680 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.86□□□□□ -0.35
Sox18P43680 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Mospd4-201ENSMUST00000180618 576 ntBASIC12.86□□□□□ -0.35
Sox18P43680 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sox18P43680 Gm43553-201ENSMUST00000200900 685 ntBASIC12.86□□□□□ -0.35
Sox18P43680 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox18P43680 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.86□□□□□ -0.35
Sox18P43680 AC172027.1-201ENSMUST00000217659 337 ntBASIC12.86□□□□□ -0.35
Sox18P43680 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.86□□□□□ -0.35
Sox18P43680 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.86□□□□□ -0.35
Sox18P43680 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Sox18P43680 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sox18P43680 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.86□□□□□ -0.35
Sox18P43680 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sox18P43680 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sox18P43680 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.86□□□□□ -0.35
Sox18P43680 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox18P43680 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.85□□□□□ -0.35
Sox18P43680 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.85□□□□□ -0.35
Sox18P43680 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sox18P43680 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Sox18P43680 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.85□□□□□ -0.35
Sox18P43680 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox18P43680 Defa-ps4-201ENSMUST00000118021 183 ntBASIC12.85□□□□□ -0.35
Sox18P43680 Gm4909-201ENSMUST00000118749 794 ntBASIC12.85□□□□□ -0.35
Sox18P43680 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Sox18P43680 Gm6222-202ENSMUST00000182143 629 ntBASIC12.85□□□□□ -0.35
Sox18P43680 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox18P43680 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox18P43680 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.85□□□□□ -0.35
Sox18P43680 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.85□□□□□ -0.35
Sox18P43680 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.85□□□□□ -0.35
Sox18P43680 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.85□□□□□ -0.35
Sox18P43680 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox18P43680 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sox18P43680 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox18P43680 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox18P43680 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox18P43680 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox18P43680 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.84□□□□□ -0.35
Sox18P43680 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox18P43680 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox18P43680 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms