Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HttP42859 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HttP42859 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.82□□□□□ -0.2
HttP42859 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.82□□□□□ -0.2
HttP42859 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HttP42859 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC13.82□□□□□ -0.2
HttP42859 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HttP42859 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HttP42859 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.81□□□□□ -0.2
HttP42859 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.81□□□□□ -0.2
HttP42859 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.81□□□□□ -0.2
HttP42859 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HttP42859 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HttP42859 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
HttP42859 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Gm12218-201ENSMUST00000117666 399 ntBASIC13.81□□□□□ -0.2
HttP42859 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.81□□□□□ -0.2
HttP42859 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.81□□□□□ -0.2
HttP42859 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.81□□□□□ -0.2
HttP42859 Gm44158-201ENSMUST00000203881 505 ntBASIC13.81□□□□□ -0.2
HttP42859 Arhgef33-210ENSMUST00000225548 456 ntBASIC13.81□□□□□ -0.2
HttP42859 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.81□□□□□ -0.2
HttP42859 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HttP42859 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HttP42859 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
HttP42859 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Gm15595-201ENSMUST00000120840 961 ntBASIC13.81□□□□□ -0.2
HttP42859 Gm5733-201ENSMUST00000190232 939 ntBASIC13.81□□□□□ -0.2
HttP42859 Gm44980-201ENSMUST00000205826 314 ntBASIC13.81□□□□□ -0.2
HttP42859 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.81□□□□□ -0.2
HttP42859 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HttP42859 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.8□□□□□ -0.2
HttP42859 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Gm12501-201ENSMUST00000119163 529 ntBASIC13.8□□□□□ -0.2
HttP42859 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.8□□□□□ -0.2
HttP42859 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.8□□□□□ -0.2
HttP42859 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.8□□□□□ -0.2
HttP42859 Gm2517-201ENSMUST00000215651 348 ntBASIC13.8□□□□□ -0.2
HttP42859 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.8□□□□□ -0.2
HttP42859 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.8□□□□□ -0.2
HttP42859 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.8□□□□□ -0.2
HttP42859 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.8□□□□□ -0.2
HttP42859 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.8□□□□□ -0.2
HttP42859 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.8□□□□□ -0.2
HttP42859 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.8□□□□□ -0.2
HttP42859 Gm17827-201ENSMUST00000211825 742 ntBASIC13.8□□□□□ -0.2
HttP42859 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.8□□□□□ -0.2
HttP42859 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.8□□□□□ -0.2
HttP42859 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HttP42859 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
HttP42859 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HttP42859 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HttP42859 Mir1956-201ENSMUST00000157748 65 ntBASIC13.79□□□□□ -0.2
HttP42859 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.79□□□□□ -0.2
HttP42859 Gm42657-201ENSMUST00000201746 211 ntBASIC13.79□□□□□ -0.2
HttP42859 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms