Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 Gm8762-201ENSMUST00000193486 339 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mmp3P28862 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.24□□□□□ -0.13
Mmp3P28862 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Mmp3P28862 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Mmp3P28862 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Mmp3P28862 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Gm14723-201ENSMUST00000118686 215 ntBASIC14.24□□□□□ -0.13
Mmp3P28862 Gm11591-201ENSMUST00000120063 702 ntBASIC14.24□□□□□ -0.13
Mmp3P28862 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.24□□□□□ -0.13
Mmp3P28862 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.24□□□□□ -0.13
Mmp3P28862 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.24□□□□□ -0.13
Mmp3P28862 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.24□□□□□ -0.13
Mmp3P28862 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.24□□□□□ -0.13
Mmp3P28862 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.24□□□□□ -0.13
Mmp3P28862 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.24□□□□□ -0.13
Mmp3P28862 Gm19163-201ENSMUST00000223313 780 ntBASIC14.24□□□□□ -0.13
Mmp3P28862 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.24□□□□□ -0.13
Mmp3P28862 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.24□□□□□ -0.13
Mmp3P28862 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.24□□□□□ -0.13
Mmp3P28862 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Mmp3P28862 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Mmp3P28862 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Mmp3P28862 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.24□□□□□ -0.13
Mmp3P28862 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp3P28862 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.23□□□□□ -0.13
Mmp3P28862 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.23□□□□□ -0.13
Mmp3P28862 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Mmp3P28862 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.23□□□□□ -0.13
Mmp3P28862 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.23□□□□□ -0.13
Mmp3P28862 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Mmp3P28862 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.23□□□□□ -0.13
Mmp3P28862 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.23□□□□□ -0.13
Mmp3P28862 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.23□□□□□ -0.13
Mmp3P28862 Gm42627-201ENSMUST00000197347 224 ntBASIC14.23□□□□□ -0.13
Mmp3P28862 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.23□□□□□ -0.13
Mmp3P28862 Gm6458-201ENSMUST00000211573 635 ntBASIC14.23□□□□□ -0.13
Mmp3P28862 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.23□□□□□ -0.13
Mmp3P28862 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Mmp3P28862 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Mmp3P28862 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.23□□□□□ -0.13
Mmp3P28862 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.23□□□□□ -0.13
Mmp3P28862 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.23□□□□□ -0.13
Mmp3P28862 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp3P28862 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.22□□□□□ -0.13
Mmp3P28862 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Mmp3P28862 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Mmp3P28862 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms