Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Mir1247-201ENSMUST00000116706 82 ntBASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Gm15460-201ENSMUST00000118147 391 ntBASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfrsf9P20334 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Gm18307-201ENSMUST00000206864 949 ntBASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfrsf9P20334 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms