Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc6P10629 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Gm8738-201ENSMUST00000172606 329 ntBASIC14.74□□□□□ -0.05
Hoxc6P10629 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Gm32025-201ENSMUST00000217960 307 ntBASIC14.74□□□□□ -0.05
Hoxc6P10629 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.74□□□□□ -0.05
Hoxc6P10629 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Hoxc6P10629 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc6P10629 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.73□□□□□ -0.05
Hoxc6P10629 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.73□□□□□ -0.05
Hoxc6P10629 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.73□□□□□ -0.05
Hoxc6P10629 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.73□□□□□ -0.05
Hoxc6P10629 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.73□□□□□ -0.05
Hoxc6P10629 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.73□□□□□ -0.05
Hoxc6P10629 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Hoxc6P10629 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc6P10629 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.73□□□□□ -0.05
Hoxc6P10629 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.72□□□□□ -0.05
Hoxc6P10629 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Hoxc6P10629 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.72□□□□□ -0.05
Hoxc6P10629 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.72□□□□□ -0.05
Hoxc6P10629 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.72□□□□□ -0.05
Hoxc6P10629 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.72□□□□□ -0.05
Hoxc6P10629 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Rps4l-202ENSMUST00000204242 789 ntBASIC14.72□□□□□ -0.05
Hoxc6P10629 Gm45186-201ENSMUST00000206874 478 ntBASIC14.72□□□□□ -0.05
Hoxc6P10629 Gm30285-201ENSMUST00000214614 422 ntBASIC14.72□□□□□ -0.05
Hoxc6P10629 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.72□□□□□ -0.05
Hoxc6P10629 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.72□□□□□ -0.05
Hoxc6P10629 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.72□□□□□ -0.05
Hoxc6P10629 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Hoxc6P10629 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.72□□□□□ -0.05
Hoxc6P10629 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxc6P10629 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms