Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.63□□□□□ -0.55
UbbP0CG49 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.63□□□□□ -0.55
UbbP0CG49 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
UbbP0CG49 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.63□□□□□ -0.55
UbbP0CG49 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Gm5264-201ENSMUST00000190584 848 ntBASIC11.63□□□□□ -0.55
UbbP0CG49 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.63□□□□□ -0.55
UbbP0CG49 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
UbbP0CG49 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
UbbP0CG49 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
UbbP0CG49 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UbbP0CG49 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.62□□□□□ -0.55
UbbP0CG49 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
UbbP0CG49 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.62□□□□□ -0.55
UbbP0CG49 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
UbbP0CG49 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
UbbP0CG49 Gm15770-201ENSMUST00000117498 584 ntBASIC11.62□□□□□ -0.55
UbbP0CG49 Gm12428-201ENSMUST00000119844 727 ntBASIC11.62□□□□□ -0.55
UbbP0CG49 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.62□□□□□ -0.55
UbbP0CG49 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.62□□□□□ -0.55
UbbP0CG49 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
UbbP0CG49 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
UbbP0CG49 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
UbbP0CG49 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
UbbP0CG49 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Gm9229-201ENSMUST00000222777 126 ntBASIC11.62□□□□□ -0.55
UbbP0CG49 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
UbbP0CG49 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
UbbP0CG49 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
UbbP0CG49 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
UbbP0CG49 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.62□□□□□ -0.55
UbbP0CG49 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.61□□□□□ -0.55
UbbP0CG49 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.61□□□□□ -0.55
UbbP0CG49 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
UbbP0CG49 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.61□□□□□ -0.55
UbbP0CG49 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UbbP0CG49 Gm15678-201ENSMUST00000117573 960 ntBASIC11.61□□□□□ -0.55
UbbP0CG49 Gm15393-201ENSMUST00000120499 219 ntBASIC11.61□□□□□ -0.55
UbbP0CG49 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms