Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC17.17■□□□□ 0.34
Hoxc9P09633 Gm11531-201ENSMUST00000117614 555 ntBASIC17.17■□□□□ 0.34
Hoxc9P09633 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.17■□□□□ 0.34
Hoxc9P09633 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC17.17■□□□□ 0.34
Hoxc9P09633 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC17.17■□□□□ 0.34
Hoxc9P09633 Gm19963-201ENSMUST00000208413 1255 ntBASIC17.17■□□□□ 0.34
Hoxc9P09633 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC17.17■□□□□ 0.34
Hoxc9P09633 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC17.17■□□□□ 0.34
Hoxc9P09633 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC17.16■□□□□ 0.34
Hoxc9P09633 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Hoxc9P09633 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hoxc9P09633 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Gm24830-201ENSMUST00000102024 166 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Gm12715-201ENSMUST00000121430 1128 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Gm25890-201ENSMUST00000177643 165 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Rnu1b2-201ENSMUST00000178073 165 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Rnu1b1-201ENSMUST00000178250 165 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Gm22614-201ENSMUST00000178300 165 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.16■□□□□ 0.34
Hoxc9P09633 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC17.16■□□□□ 0.34
Hoxc9P09633 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hoxc9P09633 Gm22042-201ENSMUST00000082989 165 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Gm26232-201ENSMUST00000083360 166 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Gm24136-201ENSMUST00000083374 165 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Rnu1b6-201ENSMUST00000083839 166 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Gm26110-201ENSMUST00000083971 165 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 AC167669.2-201ENSMUST00000224417 1620 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC17.16■□□□□ 0.34
Hoxc9P09633 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.16■□□□□ 0.34
Hoxc9P09633 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hoxc9P09633 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Hoxc9P09633 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hoxc9P09633 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Hoxc9P09633 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hoxc9P09633 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hoxc9P09633 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC17.15■□□□□ 0.34
Hoxc9P09633 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hoxc9P09633 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC17.15■□□□□ 0.34
Hoxc9P09633 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.15■□□□□ 0.34
Hoxc9P09633 Gm4366-201ENSMUST00000201488 1342 ntBASIC17.15■□□□□ 0.34
Hoxc9P09633 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.15■□□□□ 0.34
Hoxc9P09633 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.15■□□□□ 0.34
Hoxc9P09633 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.15■□□□□ 0.34
Hoxc9P09633 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.15■□□□□ 0.34
Hoxc9P09633 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxc9P09633 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hoxc9P09633 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hoxc9P09633 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Hoxc9P09633 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxc9P09633 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Hoxc9P09633 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms