Protein–RNA interactions for Protein: P09602

Hmgn2, Non-histone chromosomal protein HMG-17, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn2P09602 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn2P09602 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn2P09602 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Hmgn2P09602 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn2P09602 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn2P09602 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn2P09602 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn2P09602 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn2P09602 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn2P09602 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgn2P09602 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Hmgn2P09602 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hmgn2P09602 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hmgn2P09602 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Hmgn2P09602 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Gm7488-201ENSMUST00000117148 684 ntBASIC12.05□□□□□ -0.48
Hmgn2P09602 Gm12341-201ENSMUST00000119724 503 ntBASIC12.05□□□□□ -0.48
Hmgn2P09602 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.05□□□□□ -0.48
Hmgn2P09602 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.05□□□□□ -0.48
Hmgn2P09602 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmgn2P09602 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.05□□□□□ -0.48
Hmgn2P09602 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmgn2P09602 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Gm38223-201ENSMUST00000194484 695 ntBASIC12.05□□□□□ -0.48
Hmgn2P09602 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.05□□□□□ -0.48
Hmgn2P09602 Gm45841-201ENSMUST00000207700 164 ntBASIC12.05□□□□□ -0.48
Hmgn2P09602 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.05□□□□□ -0.48
Hmgn2P09602 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.05□□□□□ -0.48
Hmgn2P09602 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Hmgn2P09602 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.05□□□□□ -0.48
Hmgn2P09602 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
Hmgn2P09602 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.05□□□□□ -0.48
Hmgn2P09602 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.05□□□□□ -0.48
Hmgn2P09602 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn2P09602 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.05□□□□□ -0.48
Hmgn2P09602 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hmgn2P09602 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.04□□□□□ -0.48
Hmgn2P09602 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hmgn2P09602 Gm12859-201ENSMUST00000117834 427 ntBASIC12.04□□□□□ -0.48
Hmgn2P09602 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hmgn2P09602 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Hmgn2P09602 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.04□□□□□ -0.48
Hmgn2P09602 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.04□□□□□ -0.48
Hmgn2P09602 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.04□□□□□ -0.48
Hmgn2P09602 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.04□□□□□ -0.48
Hmgn2P09602 Gm37917-201ENSMUST00000194711 392 ntBASIC12.04□□□□□ -0.48
Hmgn2P09602 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.04□□□□□ -0.48
Hmgn2P09602 Gm18307-201ENSMUST00000206864 949 ntBASIC12.04□□□□□ -0.48
Hmgn2P09602 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.04□□□□□ -0.48
Hmgn2P09602 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.04□□□□□ -0.48
Hmgn2P09602 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.04□□□□□ -0.48
Hmgn2P09602 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.04□□□□□ -0.48
Hmgn2P09602 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn2P09602 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms