Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Gm29608-201ENSMUST00000190444 463 ntBASIC10.92□□□□□ -0.66
LtaP09225 Gm8463-201ENSMUST00000208573 613 ntBASIC10.92□□□□□ -0.66
LtaP09225 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.92□□□□□ -0.66
LtaP09225 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.92□□□□□ -0.66
LtaP09225 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.92□□□□□ -0.66
LtaP09225 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LtaP09225 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.92□□□□□ -0.66
LtaP09225 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.92□□□□□ -0.66
LtaP09225 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.92□□□□□ -0.66
LtaP09225 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.91□□□□□ -0.66
LtaP09225 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.91□□□□□ -0.66
LtaP09225 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
LtaP09225 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
LtaP09225 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
LtaP09225 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LtaP09225 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
LtaP09225 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.91□□□□□ -0.66
LtaP09225 Gm6244-201ENSMUST00000178732 841 ntBASIC10.91□□□□□ -0.66
LtaP09225 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Gm5186-201ENSMUST00000218781 920 ntBASIC10.91□□□□□ -0.66
LtaP09225 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.91□□□□□ -0.66
LtaP09225 Gm26315-201ENSMUST00000083890 321 ntBASIC10.91□□□□□ -0.66
LtaP09225 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
LtaP09225 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LtaP09225 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LtaP09225 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.91□□□□□ -0.66
LtaP09225 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LtaP09225 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.91□□□□□ -0.66
LtaP09225 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LtaP09225 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
LtaP09225 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
LtaP09225 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.9□□□□□ -0.66
LtaP09225 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.9□□□□□ -0.66
LtaP09225 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
LtaP09225 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.9□□□□□ -0.66
LtaP09225 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.9□□□□□ -0.66
LtaP09225 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LtaP09225 Gm38671-201ENSMUST00000200573 130 ntBASIC10.9□□□□□ -0.66
LtaP09225 Gm7287-201ENSMUST00000205267 602 ntBASIC10.9□□□□□ -0.66
LtaP09225 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
LtaP09225 Gm18473-201ENSMUST00000220543 868 ntBASIC10.9□□□□□ -0.66
LtaP09225 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms