Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.32□□□□□ -0.28
Hoxb3P09026 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hoxb3P09026 Gm29155-201ENSMUST00000185910 269 ntBASIC13.32□□□□□ -0.28
Hoxb3P09026 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hoxb3P09026 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Gm18212-201ENSMUST00000211678 889 ntBASIC13.32□□□□□ -0.28
Hoxb3P09026 AC132881.2-201ENSMUST00000225474 709 ntBASIC13.32□□□□□ -0.28
Hoxb3P09026 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.32□□□□□ -0.28
Hoxb3P09026 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hoxb3P09026 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Hoxb3P09026 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxb3P09026 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Hoxb3P09026 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Gm5687-201ENSMUST00000118252 640 ntBASIC13.31□□□□□ -0.28
Hoxb3P09026 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxb3P09026 Gm25732-201ENSMUST00000175168 60 ntBASIC13.31□□□□□ -0.28
Hoxb3P09026 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Gm28975-201ENSMUST00000186412 686 ntBASIC13.31□□□□□ -0.28
Hoxb3P09026 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxb3P09026 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxb3P09026 Gm7600-201ENSMUST00000209657 785 ntBASIC13.31□□□□□ -0.28
Hoxb3P09026 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Hoxb3P09026 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.31□□□□□ -0.28
Hoxb3P09026 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxb3P09026 AC102542.1-201ENSMUST00000225204 1138 ntBASIC13.31□□□□□ -0.28
Hoxb3P09026 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Hoxb3P09026 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hoxb3P09026 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Hoxb3P09026 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.31□□□□□ -0.28
Hoxb3P09026 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxb3P09026 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hoxb3P09026 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hoxb3P09026 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.3□□□□□ -0.28
Hoxb3P09026 Gm1335-201ENSMUST00000121653 386 ntBASIC13.3□□□□□ -0.28
Hoxb3P09026 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hoxb3P09026 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hoxb3P09026 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hoxb3P09026 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.3□□□□□ -0.28
Hoxb3P09026 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hoxb3P09026 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Hoxb3P09026 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hoxb3P09026 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxb3P09026 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms