Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ApoeP08226 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ApoeP08226 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ApoeP08226 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ApoeP08226 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ApoeP08226 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ApoeP08226 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ApoeP08226 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ApoeP08226 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
ApoeP08226 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ApoeP08226 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.64□□□□□ -0.39
ApoeP08226 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ApoeP08226 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.63□□□□□ -0.39
ApoeP08226 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
ApoeP08226 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ApoeP08226 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.63□□□□□ -0.39
ApoeP08226 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
ApoeP08226 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
ApoeP08226 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.63□□□□□ -0.39
ApoeP08226 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.63□□□□□ -0.39
ApoeP08226 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.63□□□□□ -0.39
ApoeP08226 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Gm4804-201ENSMUST00000182234 999 ntBASIC12.63□□□□□ -0.39
ApoeP08226 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.63□□□□□ -0.39
ApoeP08226 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ApoeP08226 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.63□□□□□ -0.39
ApoeP08226 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ApoeP08226 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ApoeP08226 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ApoeP08226 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.63□□□□□ -0.39
ApoeP08226 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ApoeP08226 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.62□□□□□ -0.39
ApoeP08226 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ApoeP08226 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.62□□□□□ -0.39
ApoeP08226 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.62□□□□□ -0.39
ApoeP08226 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Gm10175-201ENSMUST00000086013 645 ntBASIC12.62□□□□□ -0.39
ApoeP08226 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
ApoeP08226 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.62□□□□□ -0.39
ApoeP08226 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.62□□□□□ -0.39
ApoeP08226 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
ApoeP08226 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
ApoeP08226 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.62□□□□□ -0.39
ApoeP08226 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ApoeP08226 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ApoeP08226 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ApoeP08226 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ApoeP08226 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ApoeP08226 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ApoeP08226 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ApoeP08226 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ApoeP08226 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ApoeP08226 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ApoeP08226 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ApoeP08226 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.61□□□□□ -0.39
ApoeP08226 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ApoeP08226 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms