Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.14□□□□□ -0.15
TnfP06804 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TnfP06804 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
TnfP06804 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TnfP06804 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TnfP06804 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Gm7029-201ENSMUST00000173226 450 ntBASIC14.13□□□□□ -0.15
TnfP06804 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Gm26927-201ENSMUST00000182385 965 ntBASIC14.13□□□□□ -0.15
TnfP06804 Gm27572-201ENSMUST00000183702 255 ntBASIC14.13□□□□□ -0.15
TnfP06804 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.13□□□□□ -0.15
TnfP06804 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.13□□□□□ -0.15
TnfP06804 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.13□□□□□ -0.15
TnfP06804 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TnfP06804 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TnfP06804 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
TnfP06804 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.13□□□□□ -0.15
TnfP06804 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TnfP06804 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TnfP06804 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.12□□□□□ -0.15
TnfP06804 Gm2231-201ENSMUST00000125661 612 ntBASIC14.12□□□□□ -0.15
TnfP06804 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TnfP06804 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TnfP06804 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.12□□□□□ -0.15
TnfP06804 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.12□□□□□ -0.15
TnfP06804 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
TnfP06804 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TnfP06804 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.12□□□□□ -0.15
TnfP06804 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TnfP06804 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TnfP06804 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TnfP06804 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TnfP06804 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.11□□□□□ -0.15
TnfP06804 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
TnfP06804 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TnfP06804 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.11□□□□□ -0.15
TnfP06804 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.11□□□□□ -0.15
TnfP06804 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.11□□□□□ -0.15
TnfP06804 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TnfP06804 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TnfP06804 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TnfP06804 Gm6007-201ENSMUST00000208170 823 ntBASIC14.11□□□□□ -0.15
TnfP06804 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnfP06804 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms