Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Acot6-202ENSMUST00000222921 3622 ntBASIC11.91□□□□□ -0.5
P06344 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.91□□□□□ -0.5
P06344 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
P06344 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
P06344 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.9□□□□□ -0.5
P06344 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
P06344 Gm11814-201ENSMUST00000119515 929 ntBASIC11.9□□□□□ -0.5
P06344 Gm15824-201ENSMUST00000119516 955 ntBASIC11.9□□□□□ -0.5
P06344 Gm13829-201ENSMUST00000119600 138 ntBASIC11.9□□□□□ -0.5
P06344 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.9□□□□□ -0.5
P06344 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
P06344 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.9□□□□□ -0.5
P06344 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
P06344 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.9□□□□□ -0.5
P06344 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.9□□□□□ -0.5
P06344 Gm26315-201ENSMUST00000083890 321 ntBASIC11.9□□□□□ -0.5
P06344 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
P06344 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
P06344 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
P06344 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.9□□□□□ -0.5
P06344 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
P06344 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
P06344 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
P06344 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
P06344 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.89□□□□□ -0.51
P06344 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
P06344 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.89□□□□□ -0.51
P06344 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.89□□□□□ -0.51
P06344 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P06344 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.89□□□□□ -0.51
P06344 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.89□□□□□ -0.51
P06344 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.89□□□□□ -0.51
P06344 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.89□□□□□ -0.51
P06344 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
P06344 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.89□□□□□ -0.51
P06344 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.89□□□□□ -0.51
P06344 Gm8652-201ENSMUST00000181363 964 ntBASIC11.89□□□□□ -0.51
P06344 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.89□□□□□ -0.51
P06344 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Gm6266-201ENSMUST00000203844 806 ntBASIC11.89□□□□□ -0.51
P06344 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.89□□□□□ -0.51
P06344 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
P06344 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P06344 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P06344 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms