Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.71□□□□□ -0.53
P04224 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Matn2-203ENSMUST00000226766 3252 ntBASIC11.71□□□□□ -0.53
P04224 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
P04224 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.71□□□□□ -0.53
P04224 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.71□□□□□ -0.53
P04224 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.71□□□□□ -0.53
P04224 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.71□□□□□ -0.53
P04224 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.71□□□□□ -0.53
P04224 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
P04224 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
P04224 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.71□□□□□ -0.53
P04224 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
P04224 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.7□□□□□ -0.54
P04224 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
P04224 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.7□□□□□ -0.54
P04224 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P04224 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P04224 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
P04224 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.7□□□□□ -0.54
P04224 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.7□□□□□ -0.54
P04224 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.7□□□□□ -0.54
P04224 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Gm5364-201ENSMUST00000216789 889 ntBASIC11.7□□□□□ -0.54
P04224 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.7□□□□□ -0.54
P04224 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.7□□□□□ -0.54
P04224 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.7□□□□□ -0.54
P04224 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P04224 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
P04224 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P04224 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
P04224 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.69□□□□□ -0.54
P04224 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.69□□□□□ -0.54
P04224 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.69□□□□□ -0.54
P04224 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.69□□□□□ -0.54
P04224 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
P04224 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
P04224 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P04224 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms