Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Gm13233-201ENSMUST00000118760 1443 ntBASIC9.74□□□□□ -0.85
TcraP01849 Gm13244-201ENSMUST00000118855 1446 ntBASIC9.74□□□□□ -0.85
TcraP01849 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.74□□□□□ -0.85
TcraP01849 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Gm7049-201ENSMUST00000223520 1712 ntBASIC9.74□□□□□ -0.85
TcraP01849 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.74□□□□□ -0.85
TcraP01849 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
TcraP01849 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC9.74□□□□□ -0.85
TcraP01849 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Gm13597-201ENSMUST00000121239 375 ntBASIC9.74□□□□□ -0.85
TcraP01849 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC9.74□□□□□ -0.85
TcraP01849 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Gm5177-201ENSMUST00000183092 997 ntBASIC9.74□□□□□ -0.85
TcraP01849 Gm27301-201ENSMUST00000184012 127 ntBASIC9.74□□□□□ -0.85
TcraP01849 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC9.74□□□□□ -0.85
TcraP01849 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC9.74□□□□□ -0.85
TcraP01849 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
TcraP01849 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 AC174742.1-201ENSMUST00000218272 304 ntBASIC9.74□□□□□ -0.85
TcraP01849 Psmb5-202ENSMUST00000227257 622 ntBASIC9.74□□□□□ -0.85
TcraP01849 CT030704.2-201ENSMUST00000228887 494 ntBASIC9.74□□□□□ -0.85
TcraP01849 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
TcraP01849 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.74□□□□□ -0.85
TcraP01849 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.74□□□□□ -0.85
TcraP01849 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
TcraP01849 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
TcraP01849 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
TcraP01849 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TcraP01849 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.73□□□□□ -0.85
TcraP01849 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.73□□□□□ -0.85
TcraP01849 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
TcraP01849 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
TcraP01849 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
TcraP01849 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Gm5385-201ENSMUST00000118988 1559 ntBASIC9.73□□□□□ -0.85
TcraP01849 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Gm16198-201ENSMUST00000118766 670 ntBASIC9.73□□□□□ -0.85
TcraP01849 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC9.73□□□□□ -0.85
TcraP01849 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
TcraP01849 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC9.73□□□□□ -0.85
TcraP01849 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC9.73□□□□□ -0.85
TcraP01849 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC9.73□□□□□ -0.85
TcraP01849 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC9.73□□□□□ -0.85
TcraP01849 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC9.73□□□□□ -0.85
TcraP01849 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms