Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.79□□□□□ -0.2
CopeO89079 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.78□□□□□ -0.2
CopeO89079 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CopeO89079 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.78□□□□□ -0.2
CopeO89079 Gm27622-201ENSMUST00000183779 60 ntBASIC13.78□□□□□ -0.2
CopeO89079 Gm27533-201ENSMUST00000183800 152 ntBASIC13.78□□□□□ -0.2
CopeO89079 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CopeO89079 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CopeO89079 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CopeO89079 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CopeO89079 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CopeO89079 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.78□□□□□ -0.2
CopeO89079 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CopeO89079 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CopeO89079 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CopeO89079 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CopeO89079 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CopeO89079 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CopeO89079 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CopeO89079 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.77□□□□□ -0.21
CopeO89079 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CopeO89079 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.77□□□□□ -0.21
CopeO89079 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CopeO89079 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.77□□□□□ -0.21
CopeO89079 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CopeO89079 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.77□□□□□ -0.21
CopeO89079 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.77□□□□□ -0.21
CopeO89079 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CopeO89079 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CopeO89079 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopeO89079 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CopeO89079 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
CopeO89079 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CopeO89079 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CopeO89079 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Gm15693-201ENSMUST00000120470 637 ntBASIC13.76□□□□□ -0.21
CopeO89079 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.76□□□□□ -0.21
CopeO89079 AW822252-206ENSMUST00000208904 237 ntBASIC13.76□□□□□ -0.21
CopeO89079 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CopeO89079 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CopeO89079 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CopeO89079 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.76□□□□□ -0.21
CopeO89079 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.76□□□□□ -0.21
CopeO89079 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.76□□□□□ -0.21
CopeO89079 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CopeO89079 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CopeO89079 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CopeO89079 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms