Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Nid2O88322 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.13■□□□□ 0.33
Nid2O88322 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC17.13■□□□□ 0.33
Nid2O88322 Gm16481-201ENSMUST00000119074 1227 ntBASIC17.13■□□□□ 0.33
Nid2O88322 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nid2O88322 Gm23363-201ENSMUST00000175024 79 ntBASIC17.13■□□□□ 0.33
Nid2O88322 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC17.13■□□□□ 0.33
Nid2O88322 AC131330.1-201ENSMUST00000227814 1015 ntBASIC17.13■□□□□ 0.33
Nid2O88322 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nid2O88322 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nid2O88322 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nid2O88322 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nid2O88322 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC17.12■□□□□ 0.33
Nid2O88322 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.12■□□□□ 0.33
Nid2O88322 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nid2O88322 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nid2O88322 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nid2O88322 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Nid2O88322 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nid2O88322 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nid2O88322 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.11■□□□□ 0.33
Nid2O88322 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.11■□□□□ 0.33
Nid2O88322 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nid2O88322 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC17.11■□□□□ 0.33
Nid2O88322 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC17.11■□□□□ 0.33
Nid2O88322 Gm24749-201ENSMUST00000157838 343 ntBASIC17.11■□□□□ 0.33
Nid2O88322 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Nid2O88322 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC17.11■□□□□ 0.33
Nid2O88322 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC17.11■□□□□ 0.33
Nid2O88322 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC17.11■□□□□ 0.33
Nid2O88322 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC17.11■□□□□ 0.33
Nid2O88322 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nid2O88322 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nid2O88322 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC17.1■□□□□ 0.33
Nid2O88322 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC17.1■□□□□ 0.33
Nid2O88322 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC17.1■□□□□ 0.33
Nid2O88322 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Gm44651-201ENSMUST00000207343 372 ntBASIC17.1■□□□□ 0.33
Nid2O88322 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nid2O88322 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nid2O88322 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC17.09■□□□□ 0.33
Nid2O88322 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms