Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.48□□□□□ -0.25
Chrna4O70174 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chrna4O70174 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.47□□□□□ -0.25
Chrna4O70174 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chrna4O70174 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.47□□□□□ -0.25
Chrna4O70174 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Chrna4O70174 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.47□□□□□ -0.25
Chrna4O70174 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Chrna4O70174 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.47□□□□□ -0.25
Chrna4O70174 Gm14928-201ENSMUST00000120198 477 ntBASIC13.47□□□□□ -0.25
Chrna4O70174 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.47□□□□□ -0.25
Chrna4O70174 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Chrna4O70174 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.47□□□□□ -0.25
Chrna4O70174 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Gm45841-201ENSMUST00000207700 164 ntBASIC13.47□□□□□ -0.25
Chrna4O70174 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.47□□□□□ -0.25
Chrna4O70174 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.47□□□□□ -0.25
Chrna4O70174 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.47□□□□□ -0.25
Chrna4O70174 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chrna4O70174 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Chrna4O70174 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.47□□□□□ -0.25
Chrna4O70174 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna4O70174 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chrna4O70174 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.46□□□□□ -0.25
Chrna4O70174 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Chrna4O70174 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.46□□□□□ -0.25
Chrna4O70174 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.46□□□□□ -0.25
Chrna4O70174 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Chrna4O70174 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.46□□□□□ -0.25
Chrna4O70174 Gm15429-201ENSMUST00000151268 798 ntBASIC13.46□□□□□ -0.25
Chrna4O70174 Gm23984-201ENSMUST00000157139 203 ntBASIC13.46□□□□□ -0.25
Chrna4O70174 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.46□□□□□ -0.25
Chrna4O70174 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.46□□□□□ -0.25
Chrna4O70174 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Gm6983-201ENSMUST00000214912 628 ntBASIC13.46□□□□□ -0.25
Chrna4O70174 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna4O70174 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna4O70174 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna4O70174 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Chrna4O70174 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna4O70174 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna4O70174 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna4O70174 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna4O70174 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna4O70174 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chrna4O70174 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.45□□□□□ -0.26
Chrna4O70174 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna4O70174 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna4O70174 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms