Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cxcl13O55038 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl13O55038 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl13O55038 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl13O55038 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl13O55038 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl13O55038 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl13O55038 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Cxcl13O55038 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.26□□□□□ -0.61
Cxcl13O55038 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Gm19184-201ENSMUST00000196798 928 ntBASIC11.26□□□□□ -0.61
Cxcl13O55038 Gm6013-201ENSMUST00000212264 699 ntBASIC11.26□□□□□ -0.61
Cxcl13O55038 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cxcl13O55038 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.26□□□□□ -0.61
Cxcl13O55038 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl13O55038 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl13O55038 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl13O55038 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.26□□□□□ -0.61
Cxcl13O55038 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.26□□□□□ -0.61
Cxcl13O55038 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl13O55038 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl13O55038 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Cxcl13O55038 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.25□□□□□ -0.61
Cxcl13O55038 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cxcl13O55038 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cxcl13O55038 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cxcl13O55038 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cxcl13O55038 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.25□□□□□ -0.61
Cxcl13O55038 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.25□□□□□ -0.61
Cxcl13O55038 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.25□□□□□ -0.61
Cxcl13O55038 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl13O55038 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Cxcl13O55038 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms