Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf13O54965 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf13O54965 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf13O54965 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf13O54965 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf13O54965 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf13O54965 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf13O54965 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf13O54965 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf13O54965 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rnf13O54965 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf13O54965 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Rnf13O54965 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf13O54965 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.12□□□□□ -0.47
Rnf13O54965 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.12□□□□□ -0.47
Rnf13O54965 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Rnf13O54965 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf13O54965 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf13O54965 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf13O54965 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf13O54965 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf13O54965 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf13O54965 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf13O54965 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.11□□□□□ -0.47
Rnf13O54965 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rnf13O54965 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rnf13O54965 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf13O54965 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf13O54965 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rnf13O54965 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf13O54965 Gm6415-201ENSMUST00000118488 348 ntBASIC12.11□□□□□ -0.47
Rnf13O54965 Gm15653-201ENSMUST00000119247 907 ntBASIC12.11□□□□□ -0.47
Rnf13O54965 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.11□□□□□ -0.47
Rnf13O54965 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rnf13O54965 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf13O54965 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf13O54965 Shd-206ENSMUST00000225145 998 ntBASIC12.11□□□□□ -0.47
Rnf13O54965 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rnf13O54965 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.11□□□□□ -0.47
Rnf13O54965 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf13O54965 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Rnf13O54965 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf13O54965 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.1□□□□□ -0.47
Rnf13O54965 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Mir874-201ENSMUST00000104769 76 ntBASIC12.1□□□□□ -0.47
Rnf13O54965 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf13O54965 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf13O54965 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf13O54965 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.1□□□□□ -0.47
Rnf13O54965 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Rnf13O54965 Gm2213-201ENSMUST00000197485 688 ntBASIC12.1□□□□□ -0.47
Rnf13O54965 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf13O54965 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf13O54965 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf13O54965 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf13O54965 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf13O54965 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.1□□□□□ -0.47
Rnf13O54965 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms