Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.13□□□□□ -0.47
Matn3O35701 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.13□□□□□ -0.47
Matn3O35701 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Matn3O35701 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 BC001981-202ENSMUST00000191393 1545 ntBASIC12.12□□□□□ -0.47
Matn3O35701 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Matn3O35701 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Matn3O35701 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.12□□□□□ -0.47
Matn3O35701 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.12□□□□□ -0.47
Matn3O35701 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Matn3O35701 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.12□□□□□ -0.47
Matn3O35701 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Matn3O35701 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.12□□□□□ -0.47
Matn3O35701 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.12□□□□□ -0.47
Matn3O35701 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.12□□□□□ -0.47
Matn3O35701 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.12□□□□□ -0.47
Matn3O35701 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Matn3O35701 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Matn3O35701 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Matn3O35701 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.11□□□□□ -0.47
Matn3O35701 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.11□□□□□ -0.47
Matn3O35701 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.11□□□□□ -0.47
Matn3O35701 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.11□□□□□ -0.47
Matn3O35701 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Mir874-201ENSMUST00000104769 76 ntBASIC12.11□□□□□ -0.47
Matn3O35701 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.11□□□□□ -0.47
Matn3O35701 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.11□□□□□ -0.47
Matn3O35701 AA543401-201ENSMUST00000164248 1269 ntBASIC12.11□□□□□ -0.47
Matn3O35701 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Matn3O35701 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.11□□□□□ -0.47
Matn3O35701 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.11□□□□□ -0.47
Matn3O35701 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Matn3O35701 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Matn3O35701 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Matn3O35701 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Matn3O35701 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.1□□□□□ -0.47
Matn3O35701 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Matn3O35701 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.1□□□□□ -0.47
Matn3O35701 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms