Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Stag2O35638 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Stag2O35638 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Gm16177-201ENSMUST00000120728 718 ntBASIC15.28■□□□□ 0.04
Stag2O35638 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.28■□□□□ 0.04
Stag2O35638 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.28■□□□□ 0.04
Stag2O35638 Gm44069-201ENSMUST00000204898 506 ntBASIC15.28■□□□□ 0.04
Stag2O35638 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.28■□□□□ 0.04
Stag2O35638 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.28■□□□□ 0.04
Stag2O35638 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.28■□□□□ 0.04
Stag2O35638 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.28■□□□□ 0.04
Stag2O35638 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.28■□□□□ 0.04
Stag2O35638 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.28■□□□□ 0.04
Stag2O35638 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Stag2O35638 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Stag2O35638 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Stag2O35638 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.28■□□□□ 0.04
Stag2O35638 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag2O35638 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.28■□□□□ 0.04
Stag2O35638 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Stag2O35638 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Stag2O35638 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag2O35638 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag2O35638 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Stag2O35638 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag2O35638 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Stag2O35638 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Stag2O35638 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.27■□□□□ 0.04
Stag2O35638 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.27■□□□□ 0.04
Stag2O35638 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.27■□□□□ 0.04
Stag2O35638 Mir1982-201ENSMUST00000157368 74 ntBASIC15.27■□□□□ 0.04
Stag2O35638 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Stag2O35638 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.27■□□□□ 0.04
Stag2O35638 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.27■□□□□ 0.04
Stag2O35638 Gm29705-201ENSMUST00000212598 474 ntBASIC15.27■□□□□ 0.04
Stag2O35638 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag2O35638 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag2O35638 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Stag2O35638 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Stag2O35638 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.27■□□□□ 0.03
Stag2O35638 Rubie-203ENSMUST00000227803 2430 ntBASIC15.27■□□□□ 0.03
Stag2O35638 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stag2O35638 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stag2O35638 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Stag2O35638 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stag2O35638 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stag2O35638 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.26■□□□□ 0.03
Stag2O35638 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Stag2O35638 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Stag2O35638 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Gm13226-201ENSMUST00000117838 404 ntBASIC15.26■□□□□ 0.03
Stag2O35638 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Gm13123-201ENSMUST00000122173 492 ntBASIC15.26■□□□□ 0.03
Stag2O35638 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.26■□□□□ 0.03
Stag2O35638 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.26■□□□□ 0.03
Stag2O35638 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.26■□□□□ 0.03
Stag2O35638 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.26■□□□□ 0.03
Stag2O35638 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.26■□□□□ 0.03
Stag2O35638 Gm45841-201ENSMUST00000207700 164 ntBASIC15.26■□□□□ 0.03
Stag2O35638 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.26■□□□□ 0.03
Stag2O35638 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag2O35638 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Stag2O35638 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.26■□□□□ 0.03
Stag2O35638 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag2O35638 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag2O35638 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag2O35638 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag2O35638 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag2O35638 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.25■□□□□ 0.03
Stag2O35638 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag2O35638 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag2O35638 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag2O35638 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Stag2O35638 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms