Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.85□□□□□ -0.51
Raet1bO08603 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.85□□□□□ -0.51
Raet1bO08603 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.85□□□□□ -0.51
Raet1bO08603 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.85□□□□□ -0.51
Raet1bO08603 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.85□□□□□ -0.51
Raet1bO08603 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Gm27437-201ENSMUST00000183429 107 ntBASIC11.85□□□□□ -0.51
Raet1bO08603 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Raet1bO08603 Gm28631-201ENSMUST00000190740 334 ntBASIC11.85□□□□□ -0.51
Raet1bO08603 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Raet1bO08603 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Raet1bO08603 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.85□□□□□ -0.51
Raet1bO08603 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Raet1bO08603 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Raet1bO08603 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Raet1bO08603 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Raet1bO08603 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Raet1bO08603 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.84□□□□□ -0.51
Raet1bO08603 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Raet1bO08603 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Raet1bO08603 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Raet1bO08603 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.84□□□□□ -0.51
Raet1bO08603 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.84□□□□□ -0.51
Raet1bO08603 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Raet1bO08603 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.84□□□□□ -0.51
Raet1bO08603 Gm42550-201ENSMUST00000201553 960 ntBASIC11.84□□□□□ -0.51
Raet1bO08603 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.84□□□□□ -0.51
Raet1bO08603 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.84□□□□□ -0.51
Raet1bO08603 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Raet1bO08603 Gm2423-201ENSMUST00000074863 733 ntBASIC11.84□□□□□ -0.51
Raet1bO08603 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Raet1bO08603 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.84□□□□□ -0.51
Raet1bO08603 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Raet1bO08603 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Raet1bO08603 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Raet1bO08603 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Raet1bO08603 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Raet1bO08603 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Raet1bO08603 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Raet1bO08603 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.83□□□□□ -0.52
Raet1bO08603 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Raet1bO08603 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.83□□□□□ -0.52
Raet1bO08603 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Raet1bO08603 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.83□□□□□ -0.52
Raet1bO08603 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Raet1bO08603 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Raet1bO08603 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Raet1bO08603 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Raet1bO08603 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Raet1bO08603 Mir874-201ENSMUST00000104769 76 ntBASIC11.83□□□□□ -0.52
Raet1bO08603 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Raet1bO08603 Gm12341-201ENSMUST00000119724 503 ntBASIC11.83□□□□□ -0.52
Raet1bO08603 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Raet1bO08603 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms