Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.17□□□□□ -0.46
Shisa8J3QNX5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.16□□□□□ -0.46
Shisa8J3QNX5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.16□□□□□ -0.46
Shisa8J3QNX5 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shisa8J3QNX5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Gm15460-201ENSMUST00000118147 391 ntBASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Gm13385-201ENSMUST00000121089 220 ntBASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Mir1897-201ENSMUST00000122581 272 ntBASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms