Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Gm5687-201ENSMUST00000118252 640 ntBASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Gm6447-201ENSMUST00000118905 835 ntBASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Itm2b-204ENSMUST00000228637 783 ntBASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpsf4lE9Q2N0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpsf4lE9Q2N0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms