Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm28043E0CXC2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Gm12585-201ENSMUST00000117307 290 ntBASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm28043E0CXC2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Gm15393-201ENSMUST00000120499 219 ntBASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Mir7023-201ENSMUST00000185093 64 ntBASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Gm21470-201ENSMUST00000187680 696 ntBASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm28043E0CXC2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms