Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx8D3YU81 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx8D3YU81 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx8D3YU81 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.17□□□□□ -0.14
Rfx8D3YU81 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx8D3YU81 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx8D3YU81 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx8D3YU81 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx8D3YU81 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx8D3YU81 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rfx8D3YU81 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.16□□□□□ -0.14
Rfx8D3YU81 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Rfx8D3YU81 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx8D3YU81 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.15□□□□□ -0.14
Rfx8D3YU81 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.15□□□□□ -0.14
Rfx8D3YU81 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm12403-201ENSMUST00000121384 959 ntBASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm12091-201ENSMUST00000146791 830 ntBASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfx8D3YU81 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.15□□□□□ -0.15
Rfx8D3YU81 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rfx8D3YU81 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.14□□□□□ -0.15
Rfx8D3YU81 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms