Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Gm9103-201ENSMUST00000119371 405 ntBASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Gm38225-201ENSMUST00000194001 393 ntBASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Gm20553-201ENSMUST00000204205 844 ntBASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Gm12887B1AVM1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm12887B1AVM1 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.77□□□□□ -0.68
Gm12887B1AVM1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm12887B1AVM1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm12887B1AVM1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.77□□□□□ -0.68
Gm12887B1AVM1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm12887B1AVM1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm12887B1AVM1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.68
Gm12887B1AVM1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Gm14140-201ENSMUST00000119999 995 ntBASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.77□□□□□ -0.69
Gm12887B1AVM1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm12887B1AVM1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms