Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Gm13223-201ENSMUST00000118609 747 ntBASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc194A0A140LIT1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc194A0A140LIT1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc194A0A140LIT1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms