Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Gm5422-201ENSMUST00000050717 2721 ntBASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Trav13-4-dv7A0A075B6C2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Gm27494-201ENSMUST00000184735 189 ntBASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Gm18766-201ENSMUST00000189811 808 ntBASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 AC131710.1-201ENSMUST00000228336 990 ntBASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Gm10175-201ENSMUST00000086013 645 ntBASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Gm5566-201ENSMUST00000116118 459 ntBASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Gm27741-201ENSMUST00000185060 237 ntBASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Gm33320-201ENSMUST00000192232 530 ntBASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Dupd1-202ENSMUST00000224735 548 ntBASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav13-4-dv7A0A075B6C2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms