Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Gm28631-201ENSMUST00000190740 334 ntBASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Gm10576-201ENSMUST00000191927 825 ntBASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Gm42550-201ENSMUST00000201553 960 ntBASIC13.38□□□□□ -0.27
H2afb2S4R1M3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Mir6977-201ENSMUST00000184960 64 ntBASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Gm45841-201ENSMUST00000207700 164 ntBASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
H2afb2S4R1M3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms